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  1. ABSTRACT

    We characterize the kinematic and magnetic properties of H i filaments located in a high Galactic latitude region (165° < α < 195° and 12° < δ < 24°). We extract three-dimensional filamentary structures using fil3d from the Galactic Arecibo L-Band Feed Array H i (GALFA-H i) survey 21-cm emission data. Our algorithm identifies coherent emission structures in neighbouring velocity channels. Based on the mean velocity, we identify a population of local and intermediate velocity cloud (IVC) filaments. We find the orientations of the local (but not the IVC) H i filaments are aligned with the magnetic field orientations inferred from Planck 353 GHz polarized dust emission. We analyse position–velocity diagrams of the velocity-coherent filaments, and find that only 15 per cent of filaments demonstrate significant major-axis velocity gradients with a median magnitude of 0.5 km s−1 pc−1, assuming a fiducial filament distance of 100 pc. We conclude that the typical diffuse H i filament does not exhibit a simple velocity gradient. The reported filament properties constrain future theoretical models of filament formation.

     
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  2. Babski-Reeves, K ; Eksioglu, B ; Hampton, D. (Ed.)
    Extrusion-based 3D bioprinting is a promising method for repairing patient-specific tissues and organs due to its inherent capacity to release biocompatible materials containing living cells in a preset area. The filament geometry and width mostly determine the scaffold architecture. Extrusion pressure, print speed, print distance, nozzle diameter, and material viscosity are just a few of the process variables that can be carefully chosen to affect the filament shape and width, ultimately verifying the user-defined scaffold porosity. To maintain defined filament width variation for various hydrogels within an acceptable range and to confirm the overall geometric fidelity of the scaffold, in this paper, filament width for a set of biomaterial compositions was determined using an image processing technique and an analytical relationship, including various process parameters, was developed. 
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    Free, publicly-accessible full text available May 21, 2024
  3. Babski-Reeves, K ; Eksioglu, B ; Hampton, D. (Ed.)
    Extrusion-based three-dimensional (3D) bio-printing is one of the several 3D bioprinting methods that is frequently used in current times. This method enables the accurate deposition of cell-laden bio-ink while ensuring a predetermined scaffold architecture that may allow living tissue regeneration. Natural hydrogels are a strong choice for bio-ink formulation for the extrusion-based 3D bioprinting method because they have a combination of unique properties, which include biocompatibility, reduced cell toxicity, and high-water content. However, due to its low mechanical integrity, hydrogel frequently struggles to retain structural stability. To overcome this challenge, we evaluated the rheological characteristics of distinct hybrid hydrogels composed of carboxymethyl cellulose (CMC), a widely used alginate, and nanofibers generated from cellulose (TEMPO-mediated nano-fibrillated cellulose, TONFC). Therefore, to examine the rheological properties, a set of compositions was developed incorporating CMC (1%–4%), alginate (1%–4%), and higher and lower contents of TONFC (0.5%) and (0.005%) respectively. From the flow diagram, the shear thinning coefficients of n and K were calculated, which were later linked to the 3D printability. With the guidance of diverse nanofiber ratios, it is possible to regulate the rheological properties and create 3D bioprinted scaffolds with well-defined scaffold architecture. 
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    Free, publicly-accessible full text available May 21, 2024
  4. Babski-Reeves, K ; Eksioglu, B ; Hampton, D. (Ed.)
    Traditional static cell culture methods don't guarantee access to medium inside areas or through the scaffolds because of the complex three-dimensional nature of the 3D bio-printed scaffolds. The bioreactor provides the necessary growth medium encapsulated and seeded cells in 3D bioprinted scaffolds. The constant flow of new growing medium could promote more viable and multiplying cells. Therefore, we created a specialized perfusion bioreactor that dynamically supplies the growth medium to the cells implanted or encapsulated in the scaffolds. A redesigned configuration of our developed bioreactor may enhance the in vivo stimuli and circumstances, ultimately improving the effectiveness of tissue regeneration. This study investigated how different scaffold pore shapes and porosities affect the flow. We employed a simulation technique to calculate fluid flow turbulence across several pore geometries, including uniform triangular, square, circular, and honeycomb. We constructed a scaffold with changing pore diameters to examine the fluid movement while maintaining constant porosity. The impact of fluid flow was then determined by simulating and mimicking the architecture of bone tissue. The best scaffold designs were chosen based on the findings. 
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    Free, publicly-accessible full text available May 21, 2024
  5. Eds: Babski-Reeves, K ; Eksioglu, B ; Hampton, D. (Ed.)
    The emerging field of three-dimensional bio-printing seeks to recreate functional tissues for medical and pharmaceutical purposes. With the ability to print diverse materials containing different living cells, this growing area may bring us closer to achieving tissue regeneration. In previous research, we developed a Y-shaped nozzle connection device that facilitated the continuous deposition of materials across multiple filaments. This plastic device had a fixed switching angle and was intended for single use. In this study, we present an extension of our previous nozzle system. To fabricate the nozzle connectors, we chose stainless steel and considered angles of 300, 450, and 900 (both vertical and tilted) between the two materials. The total material switching time was recorded and compared to analyze the effects of these angles. We used our previously developed hybrid hydrogel (4% Alginate and 4% Carboxymethyl Cellulose, CMC) as a test material to flow through the nozzle system. These in-house fabricated nozzle connectors are reusable, and sterile and enable smooth material transition and flow. 
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    Free, publicly-accessible full text available May 21, 2024
  6. Abstract

    We present evidence for scale-independent misalignment of interstellar dust filaments and magnetic fields. We estimate the misalignment by comparing millimeter-wave dust-polarization measurements from Planck with filamentary structures identified in neutral-hydrogen (Hi) measurements from Hi4PI. We find that the misalignment angle displays a scale independence (harmonic coherence) for features larger than the Hi4PI beamwidth (16.′2). We additionally find a spatial coherence on angular scales of(1°). We present several misalignment estimators formed from the auto- and cross-spectra of dust-polarization and Hi-based maps, and we also introduce a map-space estimator. Applied to large regions of the high-Galactic-latitude sky, we find a global misalignment angle of ∼2°, which is robust to a variety of masking choices. By dividing the sky into small regions, we show that the misalignment angle correlates with the parity-violatingTBcross-spectrum measured in the Planck dust maps. The misalignment paradigm also predicts a dustEBsignal, which is of relevance in the search for cosmic birefringence but as yet undetected; the measurements ofEBare noisier than those ofTB, and our correlations ofEBwith misalignment angle are found to be weaker and less robust to masking choices. We also introduce an Hi-based dust-polarization template constructed from the Hessian matrix of the Hiintensity, which is found to correlate more strongly than previous templates with Planck dustBmodes.

     
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  7. ABSTRACT

    We measure the mean-squared polarization fraction of a sample of 6282 Galactic cold clumps at 353 GHz, consisting of Planck Galactic cold clump (PGCC) catalogue category 1 objects [flux densities measured with signal-to-noise ratio (S/N) > 4]. At 353 GHz, we find the mean-squared polarization fraction, which we define as the mean-squared polarization divided by the mean-squared intensity, to be (4.79 ± 0.44) × 10−4 equation to an $11\, \sigma$ detection of polarization. We test if the polarization fraction depends on the clumps’ physical properties, including flux density, luminosity, Galactic latitude, and physical distance. We see a trend towards increasing polarization fraction with increasing Galactic latitude, but find no evidence that polarization depends on the other tested properties. The Simons Observatory, with angular resolution of order 1 arcmin and noise levels between 22 and $54\, \mu$K−arcmin at high frequencies, will substantially enhance our ability to determine the magnetic field structure in Galactic cold clumps. At $\ge 5\, \sigma$ significance, we predict the Simons Observatory will detect at least ∼12 000 cold clumps in intensity and ∼430 cold clumps in polarization. This number of polarization detections would represent a two orders of magnitude increase over the current Planck results. We also release software that can be used to mask these Galactic cold clumps in other analyses.

     
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  8. Context. Filamentary structures in nearby molecular clouds have been found to exhibit a characteristic width of 0.1 pc, as observed in dust emission. Understanding the origin of this universal width has become a topic of central importance in the study of molecular cloud structure and the early stages of star formation. Aims. We investigate how the recovered widths of filaments depend on the distance from the observer by using previously published results from the Herschel Gould Belt Survey. Methods. We obtained updated estimates on the distances to nearby molecular clouds observed with Herschel by using recent results based on 3D dust extinction mapping and Gaia . We examined the widths of filaments from individual clouds separately, as opposed to treating them as a single population. We used these per-cloud filament widths to search for signs of variation amongst the clouds of the previously published study. Results. We find a significant dependence of the mean per-cloud filament width with distance. The distribution of mean filament widths for nearby clouds is incompatible with that of farther away clouds. The mean per-cloud widths scale with distance approximately as 4−5 times the beam size. We examine the effects of resolution by performing a convergence study of a filament profile in the Herschel image of the Taurus Molecular Cloud. We find that resolution can severely affect the shapes of radial profiles over the observed range of distances. Conclusions. We conclude that the data are inconsistent with 0.1 pc being the universal characteristic width of filaments. 
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  9. Abstract

    Identifying genetic conservation units (CUs) in threatened species is critical for the preservation of adaptive capacity and evolutionary potential in the face of climate change. However, delineating CUs in highly mobile species remains a challenge due to high rates of gene flow and genetic signatures of isolation by distance. Even when CUs are delineated in highly mobile species, the CUs often lack key biological information about what populations have the most conservation need to guide management decisions. Here we implement a framework for CU identification in the Canada Warbler (Cardellina canadensis), a migratory bird species of conservation concern, and then integrate demographic modelling and genomic offset to guide conservation decisions. We find that patterns of whole genome genetic variation in this highly mobile species are primarily driven by putative adaptive variation. Identification of CUs across the breeding range revealed that Canada Warblers fall into two evolutionarily significant units (ESU), and three putative adaptive units (AUs) in the South, East, and Northwest. Quantification of genomic offset, a metric of genetic changes necessary to maintain current gene–environment relationships, revealed significant spatial variation in climate vulnerability, with the Northwestern AU being identified as the most vulnerable to future climate change. Alternatively, quantification of past population trends within each AU revealed the steepest population declines have occurred within the Eastern AU. Overall, we illustrate that genomics‐informed CUs provide a strong foundation for identifying current and future regional threats that can be used to inform management strategies for a highly mobile species in a rapidly changing world.

     
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  10. Abstract Using the Australian Square Kilometre Array Pathfinder to measure 21 cm absorption spectra toward continuum background sources, we study the cool phase of the neutral atomic gas in the far outer disk, and in the inner Galaxy near the end of the Galactic bar at longitude 340°. In the inner Galaxy, the cool atomic gas has a smaller scale height than in the solar neighborhood, similar to the molecular gas and the super-thin stellar population in the bar. In the outer Galaxy, the cool atomic gas is mixed with the warm, neutral medium, with the cool fraction staying roughly constant with the Galactic radius. The ratio of the emission brightness temperature to the absorption, i.e., 1 − e − τ , is roughly constant for velocities corresponding to Galactic radius greater than about twice the solar circle radius. The ratio has a value of about 300 K, but this does not correspond to a physical temperature in the gas. If the gas causing the absorption has kinetic temperature of about 100 K, as in the solar neighborhood, then the value 300 K indicates that the fraction of the gas mass in this phase is one-third of the total H i mass. 
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